Brassica Synteny Blocks
Instructions
Instructions
Select a Region to Browse and a Reference species:
Examples
:
Ath Chr1:40927..262828
,
Aly c01:4074771..4337333
.
Search
Search
Landmark
:
Genome to Search
:
A. arabicum
A. lyrata
A. thaliana
B. napus
B. oleracea
B. rapa
C. rubella
C. sativa
L. alabamica
S. irio
S. parvula
T. halophila
T. salsuginea
Aligned Species
:
L. alabamica
S. parvula
A. thaliana
T. salsuginea
T. halophila
B. napus
B. oleracea
S. irio
C. rubella
A. arabicum
C. sativa
B. rapa
A. lyrata
Data Source
:
BLASTZ alignments for Oryza sativa
Brassica Synteny Blocks
OrthoCluster Perfect Synteny Blocks
Display Mode
:
Three species/panel
Click to show all species in one panel
Display_settings
Display_settings
Image widths
:
640
768
800
1024
1280
Display Mode
:
ref. species plus 2
all species in one panel
Image options
:
Chain alignments
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off
Flip minus strand panels
on
off
Grid lines
on
off
Edges
on
off
Shading
on
off