Brassica Synteny Blocks
Instructions
Instructions
Select a Region to Browse and a Reference species:
Examples
:
Ath Chr1:40927..92828
,
Aly c01:4074771..4117333
.
Search
Search
Landmark
:
Genome to Search
:
A. arabicum
A. lyrata
A. thaliana
B. napus
B. oleracea
B. rapa
C. rubella
C. sativa
L. alabamica
S. irio
S. parvula
T. halophila
T. salsuginea
Show 90 kbp
Show 50 kbp
Show 42.56 kbp
Show 25 kbp
Show 10 kbp
Show 5 kbp
Aligned Species
:
B. rapa
B. oleracea
A. arabicum
A. thaliana
S. parvula
C. rubella
C. sativa
S. irio
B. napus
L. alabamica
T. halophila
T. salsuginea
Data Source
:
BLASTZ alignments for Oryza sativa
Brassica Synteny Blocks
Display Mode
:
Three species/panel
Click to show all species in one panel
Overview
Overview
Reference genome:
A. lyrata
Aar, Ath
Aar, Ath
Bna, Cru
Bna, Cru
Csa, Lal
Csa, Lal
Sir, Spa
Sir, Spa
Tha, Tsa
Tha, Tsa
Display_settings
Display_settings
Image widths
:
640
768
800
1024
1280
Display Mode
:
ref. species plus 2
all species in one panel
Image options
:
Chain alignments
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off
Flip minus strand panels
on
off
Grid lines
on
off
Edges
on
off
Shading
on
off